Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | SAMEA3485113_05038 | Not Available | Positive | 5102232 - 5103782 | 57670.3 |
| abc transporter permease | SAMEA3485113_05039 | Not Available | Positive | 5103784 - 5104806 | 37370.3 |
| abc transporter permease | SAMEA3485113_05040 | Not Available | Positive | 5104803 - 5105699 | 32008.0 |
| d-ala-d-ala transporter subunit ddpd | SAMEA3485113_05041 | Not Available | Positive | 5105696 - 5106682 | 36121.1 |
| abc transporter atp-binding protein | SAMEA3485113_05042 | Not Available | Positive | 5106675 - 5107601 | 34828.3 |
| peroxiredoxin (osmotically-inducible protein c) | SAMEA3485113_05043 | Not Available | Negative | 5107657 - 5108088 | 15089.0 |
| biofilm-dependent modulation protein | SAMEA3485113_05044 | Not Available | Positive | 5108433 - 5108648 | 7988.24 |
| 30s ribosomal subunit s22 | SAMEA3485113_05045 | Not Available | Positive | 5108750 - 5108887 | 5096.13 |
| malate dehydrogenase | SAMEA3485113_05046 | Not Available | Positive | 5109044 - 5110741 | 63167.0 |
| alcohol dehydrogenase | SAMEA3485113_05047 | Not Available | Positive | 5110875 - 5111885 | 35371.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





