Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3485113_05028 | Not Available | Positive | 5091248 - 5091514 | 10198.5 |
| uncharacterised protein | SAMEA3485113_05029 | Not Available | Negative | 5091623 - 5091856 | 9036.08 |
| yada | SAMEA3485113_05030 | Not Available | Negative | 5091991 - 5092464 | 18305.1 |
| yacc | SAMEA3485113_05031 | Not Available | Negative | 5092581 - 5093429 | 30829.8 |
| yacb | SAMEA3485113_05032 | Not Available | Negative | 5093469 - 5093750 | 10893.3 |
| yaca | SAMEA3485113_05033 | Not Available | Negative | 5093747 - 5094016 | 10253.2 |
| glutamate/gamma-aminobutyrate antiporter (extreme acid sensitivity protein) | SAMEA3485113_05034 | Not Available | Positive | 5094971 - 5096506 | 55051.9 |
| putative lipoprotein | SAMEA3485113_05035 | Not Available | Positive | 5096637 - 5097956 | 49630.9 |
| heme-regulated cyclic amp phosphodiesterase (direct oxygen sensor protein) | SAMEA3485113_05036 | Not Available | Positive | 5098332 - 5101379 | 115343.0 |
| d-alanyl-d-alanine dipeptidase | SAMEA3485113_05037 | Not Available | Positive | 5101637 - 5102218 | 21312.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





