Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fad-dependent oxidoreductase | SAMEA3485113_04951 | Not Available | Negative | 5009701 - 5010039 | 13237.0 |
| putative fad-dependent oxidoreductase | SAMEA3485113_04952 | Not Available | Negative | 5010097 - 5010972 | 30957.2 |
| 6-pyruvoyl tetrahydrobiopterin synthase | SAMEA3485113_04953 | Not Available | Negative | 5011050 - 5011415 | 13773.6 |
| sulfite reductase (nadph) flavoprotein alpha subunit | SAMEA3485113_04954 | Not Available | Positive | 5011731 - 5013530 | 66290.4 |
| sulfite reductase (nadph) hemoprotein beta subunit | SAMEA3485113_04955 | Not Available | Positive | 5013530 - 5015242 | 63979.8 |
| phosphoadenosine phosphosulfate reductase | SAMEA3485113_04956 | Not Available | Positive | 5015316 - 5016050 | 27958.3 |
| molybdopterin-guanine dinucleotide biosynthesis protein b | SAMEA3485113_04959 | Not Available | Negative | 5016821 - 5017348 | 19387.5 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | SAMEA3485113_04960 | Not Available | Negative | 5017330 - 5017914 | 21651.1 |
| protein yihd | SAMEA3485113_04961 | Not Available | Positive | 5017984 - 5018253 | 10273.5 |
| putative regulatory protein kinase | SAMEA3485113_04962 | Not Available | Positive | 5018330 - 5019316 | 38127.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





