Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative nad(p)h oxidoreductase | SAMEA3485113_04882 | Not Available | Positive | 4941279 - 4941851 | 21292.4 |
| putative aryl-alcohol dehydrogenase (nadp(+)) | SAMEA3485113_04883 | Not Available | Positive | 4941854 - 4942060 | 7539.88 |
| transposase | SAMEA3485113_04901 | Not Available | Negative | 4954387 - 4954734 | 12885.1 |
| transposase | SAMEA3485113_04902 | Not Available | Negative | 4954731 - 4955141 | 15244.2 |
| papx protein | SAMEA3485113_04903 | Not Available | Positive | 4955771 - 4955896 | 4820.82 |
| marr family transcriptional regulator | SAMEA3485113_04904 | Not Available | Positive | 4955943 - 4956272 | 12485.0 |
| uncharacterised protein | SAMEA3485113_04905 | Not Available | Positive | 4956944 - 4957369 | 16257.5 |
| uncharacterised protein | SAMEA3485113_04906 | Not Available | Positive | 4957678 - 4957863 | 6916.72 |
| uncharacterised protein | SAMEA3485113_04907 | Not Available | Negative | 4958318 - 4958413 | 3960.83 |
| 5-deoxy-glucuronate isomerase | SAMEA3485113_04908 | Not Available | Negative | 4958539 - 4959360 | 30980.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





