Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative autotransported outer membrane protein involved in cell adhesion | SAMEA3485113_04780 | Not Available | Positive | 4833692 - 4839772 | 208289.0 |
| conjugal transfer nickase/helicase trai | SAMEA3485113_04781 | Not Available | Positive | 4840027 - 4842513 | 89122.6 |
| conjugal transfer nickase/helicase trai | SAMEA3485113_04782 | Not Available | Positive | 4842510 - 4846118 | 131484.0 |
| conjugal transfer pilus acetylation protein trax | SAMEA3485113_04783 | Not Available | Positive | 4846138 - 4846884 | 27266.5 |
| conjugal transfer fertility inhibition protein fino | SAMEA3485113_04784 | Not Available | Positive | 4846939 - 4847499 | 21162.7 |
| uncharacterised protein | SAMEA3485113_04785 | Not Available | Positive | 4847634 - 4847888 | 8682.06 |
| nuclease | SAMEA3485113_04786 | Not Available | Positive | 4849015 - 4849476 | 17852.7 |
| uncharacterised protein | SAMEA3485113_04787 | Not Available | Negative | 4850429 - 4850575 | 5652.75 |
| w0003 | SAMEA3485113_04788 | Not Available | Positive | 4850602 - 4851192 | 22946.3 |
| uncharacterised protein | SAMEA3485113_04789 | Not Available | Positive | 4851347 - 4851796 | 16820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





