Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase hydrophobic membrane anchor protein | SAMEA3485113_04758 | Not Available | Negative | 4812752 - 4813099 | 12868.3 |
| succinate dehydrogenase cytochrome b556 large membrane subunit | SAMEA3485113_04759 | Not Available | Negative | 4813093 - 4813497 | 14934.9 |
| uncharacterised protein | SAMEA3485113_04760 | Not Available | Positive | 4813878 - 4813985 | 3827.66 |
| citrate synthase | SAMEA3485113_04761 | Not Available | Positive | 4814191 - 4815474 | 48017.7 |
| smr domain protein | SAMEA3485113_04762 | Not Available | Positive | 4816142 - 4816705 | 21527.7 |
| putative signaling protein | SAMEA3485113_04763 | Not Available | Negative | 4816726 - 4817958 | 46438.8 |
| zinc transport protein | SAMEA3485113_04764 | Not Available | Positive | 4818213 - 4819196 | 36614.3 |
| uncharacterised protein | SAMEA3485113_04766 | Not Available | Positive | 4819471 - 4819644 | 6427.87 |
| atp-independent rna helicase | SAMEA3485113_04767 | Not Available | Positive | 4819674 - 4821047 | 49198.8 |
| c32 trna thiolase | SAMEA3485113_04768 | Not Available | Negative | 4821176 - 4822111 | 35461.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





