Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large-conductance mechanosensitive channel | SAMEA3485113_04728 | Not Available | Negative | 4780507 - 4780917 | 14957.7 |
| trk system potassium uptake protein trka | SAMEA3485113_04729 | Not Available | Negative | 4781047 - 4782423 | 50370.8 |
| ribosomal rna small subunit methyltransferase b | SAMEA3485113_04730 | Not Available | Negative | 4782445 - 4783734 | 48320.2 |
| methionyl-trna formyltransferase | SAMEA3485113_04731 | Not Available | Negative | 4783780 - 4784727 | 34112.4 |
| polypeptide deformylase | SAMEA3485113_04732 | Not Available | Negative | 4784742 - 4785251 | 19329.6 |
| dna protecting protein dpra | SAMEA3485113_04733 | Not Available | Positive | 4785381 - 4786505 | 41037.4 |
| protein smg | SAMEA3485113_04734 | Not Available | Positive | 4786477 - 4786950 | 18484.2 |
| putative dna topoisomerase | SAMEA3485113_04735 | Not Available | Positive | 4786979 - 4787521 | 19845.9 |
| ribosome maturation factor | SAMEA3485113_04736 | Not Available | Positive | 4787526 - 4788098 | 20669.7 |
| shikimate dehydrogenase | SAMEA3485113_04737 | Not Available | Positive | 4788103 - 4788921 | 29409.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





