Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein ymfa | SAMEA3485113_04687 | Not Available | Negative | 4758445 - 4758906 | 17429.9 |
| spermidine/putrescine abc transporter substrate-binding protein | SAMEA3485113_04688 | Not Available | Negative | 4758964 - 4760010 | 38855.0 |
| spermidine/putrescine abc transporter permease | SAMEA3485113_04689 | Not Available | Negative | 4760007 - 4760801 | 29112.7 |
| prophage lambda integrase | SAMEA3485113_04690 | Not Available | Negative | 4760968 - 4762086 | 42795.6 |
| excisionase for prophage | SAMEA3485113_04691 | Not Available | Negative | 4762055 - 4762324 | 10185.4 |
| exodeoxyribonuclease | SAMEA3485113_04692 | Not Available | Negative | 4762386 - 4763720 | 49578.2 |
| elongation factor tu | SAMEA3485113_04693 | Not Available | Positive | 4763764 - 4763901 | 4707.01 |
| bacterioferritin-associated ferredoxin | SAMEA3485113_04694 | Not Available | Positive | 4764084 - 4764278 | 7475.27 |
| bacterioferritin | SAMEA3485113_04695 | Not Available | Positive | 4764351 - 4764827 | 18353.1 |
| bifunctional prepilin peptidase hopd: leader peptidase | SAMEA3485113_04696 | Not Available | Negative | 4764824 - 4765291 | 17035.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





