Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein disaggregation chaperone | SAMEA3485113_04455 | Not Available | Positive | 4545298 - 4547871 | 95590.8 |
| delta-aminolevulinic acid dehydratase | SAMEA3485113_04456 | Not Available | Positive | 4548581 - 4549588 | 36812.3 |
| alpha-ketoglutarate-dependent taurine dioxygenase | SAMEA3485113_04457 | Not Available | Negative | 4549628 - 4550479 | 32439.3 |
| taurine abc transporter permease | SAMEA3485113_04458 | Not Available | Negative | 4550476 - 4551303 | 29557.5 |
| taurine abc transporter atp-binding protein | SAMEA3485113_04459 | Not Available | Negative | 4551300 - 4552067 | 28297.6 |
| taurine transporter substrate binding subunit | SAMEA3485113_04460 | Not Available | Negative | 4552080 - 4553042 | 34214.8 |
| lmbe-like protein | SAMEA3485113_04461 | Not Available | Positive | 4553651 - 4554322 | 24997.2 |
| putative glycosyl transferase | SAMEA3485113_04462 | Not Available | Positive | 4554332 - 4555528 | 44677.0 |
| outer membrane protein | SAMEA3485113_04463 | Not Available | Positive | 4556089 - 4556862 | 29066.8 |
| regulator protein frmr | SAMEA3485113_04464 | Not Available | Positive | 4557050 - 4557325 | 10318.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





