Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative fatty acid binding protein | SAMEA3485113_04403 | Not Available | Negative | 4488132 - 4489892 | 65610.9 |
| membrane protein ycap | SAMEA3485113_04404 | Not Available | Positive | 4490022 - 4490714 | 26269.4 |
| phosphoserine aminotransferase | SAMEA3485113_04405 | Not Available | Positive | 4490913 - 4492001 | 39840.6 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMEA3485113_04406 | Not Available | Positive | 4492072 - 4493355 | 46054.4 |
| peptidase, m48b family | SAMEA3485113_04407 | Not Available | Positive | 4493525 - 4494289 | 26778.7 |
| cytidylate kinase | SAMEA3485113_04408 | Not Available | Positive | 4494462 - 4495145 | 24747.8 |
| 30s ribosomal protein s1 | SAMEA3485113_04409 | Not Available | Positive | 4495256 - 4496929 | 61161.5 |
| integration host factor | SAMEA3485113_04410 | Not Available | Positive | 4497089 - 4497373 | 10651.8 |
| putative competence-related protein | SAMEA3485113_04411 | Not Available | Positive | 4497580 - 4499844 | 84411.9 |
| lipid a export permease msba | SAMEA3485113_04412 | Not Available | Positive | 4499881 - 4501629 | 64464.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





