Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterised protein | SAMEA3485113_04393 | Not Available | Negative | 4475943 - 4476089 | 5636.79 |
| membrane protein | SAMEA3485113_04394 | Not Available | Negative | 4476284 - 4476511 | 8183.94 |
| membrane protein, yeer | SAMEA3485113_04395 | Not Available | Negative | 4476508 - 4476717 | 7607.82 |
| cp4-44 prophage | SAMEA3485113_04396 | Not Available | Negative | 4476838 - 4479069 | 76045.2 |
| phage protein | SAMEA3485113_04397 | Not Available | Negative | 4479085 - 4479957 | 29230.7 |
| major facilitator superfamily protein | SAMEA3485113_04398 | Not Available | Positive | 4480603 - 4481751 | 41428.2 |
| putative amino acid permease | SAMEA3485113_04399 | Not Available | Positive | 4481961 - 4483391 | 52469.5 |
| pyruvate formate lyase-activating enzyme 1 | SAMEA3485113_04400 | Not Available | Negative | 4483601 - 4484341 | 28205.9 |
| formate acetyltransferase 1 | SAMEA3485113_04401 | Not Available | Negative | 4484533 - 4486815 | 85305.0 |
| formate transporter | SAMEA3485113_04402 | Not Available | Negative | 4486870 - 4487727 | 30992.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





