Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curlin minor subunit | SAMEA3485113_04373 | Not Available | Negative | 4463417 - 4463872 | 15909.8 |
| csgab operon transcriptional regulator | SAMEA3485113_04374 | Not Available | Positive | 4464627 - 4465277 | 24931.0 |
| curli production assembly/transport component | SAMEA3485113_04375 | Not Available | Positive | 4465282 - 4465671 | 14879.6 |
| curli production assembly/transport component | SAMEA3485113_04376 | Not Available | Positive | 4465696 - 4466112 | 15056.7 |
| curli production assembly/transport component | SAMEA3485113_04377 | Not Available | Positive | 4466139 - 4466972 | 30559.0 |
| inner membrane protein ycdz | SAMEA3485113_04378 | Not Available | Negative | 4467036 - 4467557 | 18126.8 |
| putative chaperone | SAMEA3485113_04379 | Not Available | Negative | 4467629 - 4468183 | 20695.3 |
| putative phosphoesterase | SAMEA3485113_04380 | Not Available | Negative | 4468207 - 4468944 | 26833.9 |
| dehydrogenase | SAMEA3485113_04381 | Not Available | Negative | 4468999 - 4469937 | 35324.5 |
| Trna-ser | Not Available | Not Available | Positive | 4470171 - 4470258 | Not Available |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





