Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein | SAMEA3485113_04353 | Not Available | Positive | 4446353 - 4446598 | 8949.43 |
| biofilm formation regulatory protein bsss | SAMEA3485113_04354 | Not Available | Positive | 4446888 - 4447142 | 9633.29 |
| n-methyl-l-tryptophan oxidase | SAMEA3485113_04355 | Not Available | Positive | 4447257 - 4448375 | 40976.2 |
| small protein involved in biofilm formation and acid stress response | SAMEA3485113_04356 | Not Available | Positive | 4448423 - 4448536 | 4719.1 |
| putative cytochrome | SAMEA3485113_04357 | Not Available | Positive | 4448797 - 4449363 | 20753.6 |
| protein ycei precursor | SAMEA3485113_04358 | Not Available | Positive | 4449367 - 4449942 | 20884.6 |
| rhodanase-like protein | SAMEA3485113_04359 | Not Available | Negative | 4449984 - 4451036 | 39738.4 |
| lipid a biosynthesis lauroyl acyltransferase | SAMEA3485113_04360 | Not Available | Positive | 4451261 - 4452181 | 35408.9 |
| multidrug resistance protein mdtg | SAMEA3485113_04361 | Not Available | Positive | 4452353 - 4452712 | 13138.4 |
| drug efflux system protein mdtg | SAMEA3485113_04362 | Not Available | Positive | 4452660 - 4453556 | 31764.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





