Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3485113_04180 | Not Available | Negative | 4280849 - 4281298 | 15831.1 |
| acetyltransferase ynca | SAMEA3485113_04181 | Not Available | Negative | 4281295 - 4281813 | 19263.8 |
| putative zinc-binding dehydrogenase | SAMEA3485113_04182 | Not Available | Positive | 4281994 - 4283031 | 37594.0 |
| gntr family transcriptional regulator | SAMEA3485113_04183 | Not Available | Positive | 4283230 - 4283895 | 25187.0 |
| tonb-dependent receptor | SAMEA3485113_04184 | Not Available | Negative | 4283931 - 4286033 | 77373.1 |
| putative receptor | SAMEA3485113_04185 | Not Available | Positive | 4286275 - 4287336 | 38658.2 |
| l-asparagine permease | SAMEA3485113_04186 | Not Available | Negative | 4287449 - 4288948 | 54236.2 |
| putative glutathione s-transferase | SAMEA3485113_04187 | Not Available | Positive | 4289213 - 4289830 | 23197.0 |
| paar repeat-containing protein | SAMEA3485113_04188 | Not Available | Positive | 4290370 - 4290654 | 9571.43 |
| type vi secretion system rhs/vgr-family protein | SAMEA3485113_04189 | Not Available | Positive | 4290673 - 4293078 | 89528.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





