Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator protein ydcr | SAMEA3485113_04170 | Not Available | Positive | 4271646 - 4273052 | 52771.8 |
| abc transporter substrate-binding protein | SAMEA3485113_04171 | Not Available | Positive | 4273297 - 4274442 | 42367.4 |
| abc transporter atp-binding protein | SAMEA3485113_04172 | Not Available | Positive | 4274460 - 4275473 | 37093.9 |
| abc transporter permease | SAMEA3485113_04173 | Not Available | Positive | 4275474 - 4276415 | 34393.3 |
| transporter permease | SAMEA3485113_04174 | Not Available | Positive | 4276405 - 4277199 | 28683.5 |
| gamma-aminobutyraldehyde dehydrogenase | SAMEA3485113_04175 | Not Available | Positive | 4277221 - 4278645 | 50803.8 |
| putative transferase | SAMEA3485113_04176 | Not Available | Positive | 4278855 - 4279664 | 31129.4 |
| uncharacterised protein | SAMEA3485113_04177 | Not Available | Positive | 4280000 - 4280197 | 7310.94 |
| inner membrane protein | SAMEA3485113_04178 | Not Available | Positive | 4280356 - 4280529 | 6674.5 |
| putative cytoplasmic protein | SAMEA3485113_04179 | Not Available | Positive | 4280615 - 4280848 | 8800.41 |
Pathways
369 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





