Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| minor pilin subunit | SAMEA3485113_04139 | Not Available | Positive | 4243376 - 4243672 | 11054.0 |
| uncharacterised protein | SAMEA3485113_04140 | Not Available | Negative | 4243541 - 4243900 | 13399.6 |
| minor pilin subunit | SAMEA3485113_04141 | Not Available | Positive | 4244188 - 4244484 | 11054.0 |
| fragment of prepilin, shufflon protein (c-ter part) | SAMEA3485113_04142 | Not Available | Negative | 4244489 - 4244728 | 8089.39 |
| shufflon-specific dna recombinase | SAMEA3485113_04143 | Not Available | Positive | 4244903 - 4246027 | 43262.7 |
| protein trae | SAMEA3485113_04144 | Not Available | Positive | 4246240 - 4247061 | 31198.1 |
| putative plasmid transfer protein | SAMEA3485113_04145 | Not Available | Positive | 4247163 - 4248365 | 42781.9 |
| uncharacterised protein | SAMEA3485113_04146 | Not Available | Negative | 4248444 - 4248941 | 18135.9 |
| putative transposase family protein | SAMEA3485113_04147 | Not Available | Negative | 4249609 - 4249950 | 12687.0 |
| uncharacterised protein | SAMEA3485113_04148 | Not Available | Negative | 4250283 - 4251296 | 38258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





