Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative pilm protein | SAMEA3485113_04129 | Not Available | Positive | 4233383 - 4233820 | 16044.2 |
| bundle-forming pilus b | SAMEA3485113_04130 | Not Available | Positive | 4234010 - 4235635 | 57086.2 |
| putative pilin accessory protein pilo | SAMEA3485113_04131 | Not Available | Positive | 4235647 - 4236945 | 48608.7 |
| pilus type iv assembly protein | SAMEA3485113_04132 | Not Available | Positive | 4236935 - 4237396 | 16473.7 |
| type iv pilus (atpase) | SAMEA3485113_04133 | Not Available | Positive | 4237406 - 4238926 | 56737.0 |
| membrane protein | SAMEA3485113_04134 | Not Available | Positive | 4238928 - 4240028 | 41484.1 |
| major pillin subunit | SAMEA3485113_04135 | Not Available | Positive | 4240078 - 4240614 | 19420.2 |
| peptidoglycan-binding-like protein | SAMEA3485113_04136 | Not Available | Positive | 4240673 - 4241149 | 18058.2 |
| prepilin peptidase | SAMEA3485113_04137 | Not Available | Positive | 4241162 - 4241812 | 23498.6 |
| minor pilin subunit | SAMEA3485113_04138 | Not Available | Positive | 4241809 - 4243011 | 43439.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





