Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor-like protein | SAMEA3485113_04099 | Not Available | Negative | 4203474 - 4204088 | 22926.2 |
| rtcb protein | SAMEA3485113_04100 | Not Available | Negative | 4204085 - 4205224 | 41381.5 |
| putative acetyltransferase | SAMEA3485113_04101 | Not Available | Negative | 4205415 - 4205789 | 14392.2 |
| toxin yafo | SAMEA3485113_04102 | Not Available | Negative | 4206078 - 4206275 | 7610.22 |
| antitoxin of the yafo-yafn toxin-antitoxin system | SAMEA3485113_04103 | Not Available | Negative | 4206278 - 4206571 | 11264.4 |
| dna polymerase iv | SAMEA3485113_04104 | Not Available | Negative | 4206623 - 4207678 | 39522.2 |
| lateral flagellar motor protein b (motb-like) | SAMEA3485113_04105 | Not Available | Negative | 4207749 - 4208384 | 23745.6 |
| flagellar system protein | SAMEA3485113_04106 | Not Available | Positive | 4208479 - 4210218 | 63176.1 |
| rayt rep element-mobilizing transposase | SAMEA3485113_04107 | Not Available | Negative | 4210556 - 4211053 | 19987.8 |
| lipoprotein | SAMEA3485113_04108 | Not Available | Negative | 4211230 - 4211988 | 29267.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





