Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small predicted membrane protein | SAMEA3485113_04068 | Not Available | Positive | 4173714 - 4173815 | 3999.01 |
| 50s ribosomal protein l31 | SAMEA3485113_04069 | Not Available | Positive | 4174171 - 4174437 | 10051.9 |
| 50s ribosomal protein l36 | SAMEA3485113_04070 | Not Available | Positive | 4174437 - 4174577 | 5466.94 |
| putative fimbrial transcriptional regulator | SAMEA3485113_04071 | Not Available | Positive | 4175661 - 4176203 | 21200.7 |
| fimbrillin | SAMEA3485113_04072 | Not Available | Positive | 4176278 - 4176865 | 20112.5 |
| putative fimbrial protein | SAMEA3485113_04073 | Not Available | Positive | 4176923 - 4177591 | 24518.3 |
| putative fimbrial outer membrane usher protein | SAMEA3485113_04074 | Not Available | Positive | 4177617 - 4180142 | 91267.7 |
| putative fimbrial protein | SAMEA3485113_04075 | Not Available | Positive | 4180132 - 4181775 | 59829.9 |
| putative fimbrial protein | SAMEA3485113_04076 | Not Available | Positive | 4181744 - 4182454 | 26622.6 |
| integral membrane protein | SAMEA3485113_04078 | Not Available | Negative | 4183345 - 4183959 | 22968.1 |
Pathways
1276 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





