Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malate:quinone oxidoreductase | SAMEA3485113_04056 | Not Available | Negative | 4157651 - 4159297 | 60248.1 |
| abc transporter atpase/permease | SAMEA3485113_04057 | Not Available | Negative | 4159515 - 4161158 | 61555.4 |
| alpha-ketoglutarate-dependent dioxygenase (alkylated dna repair protein) | SAMEA3485113_04058 | Not Available | Negative | 4161234 - 4161884 | 24049.7 |
| regulatory protein of adaptative response | SAMEA3485113_04059 | Not Available | Negative | 4161884 - 4162948 | 39327.9 |
| thiamine biosynthesis lipoprotein | SAMEA3485113_04060 | Not Available | Negative | 4163022 - 4164077 | 38590.0 |
| outer membrane porin protein c | SAMEA3485113_04061 | Not Available | Negative | 4164189 - 4165316 | 41323.5 |
| two-component system sensor kinase | SAMEA3485113_04063 | Not Available | Positive | 4166055 - 4168727 | 100323.0 |
| transcriptional regulator rcsb | SAMEA3485113_04064 | Not Available | Positive | 4168744 - 4169394 | 23672.0 |
| two-component system sensor kinase | SAMEA3485113_04065 | Not Available | Negative | 4169594 - 4172443 | 106543.0 |
| putative nadh:flavin oxidoreductase | SAMEA3485113_04067 | Not Available | Positive | 4172940 - 4173242 | 10834.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





