Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | SAMEA3485113_04026 | Not Available | Positive | 4129758 - 4130783 | 38117.7 |
| abc transporter atp-binding protein | SAMEA3485113_04027 | Not Available | Positive | 4130785 - 4132374 | 58635.7 |
| protein | SAMEA3485113_04028 | Not Available | Negative | 4132378 - 4132722 | 12525.9 |
| bicyclomycin resistance protein | SAMEA3485113_04029 | Not Available | Negative | 4133055 - 4134245 | 43355.4 |
| 16s rrna pseudouridylate synthase a | SAMEA3485113_04030 | Not Available | Negative | 4134273 - 4134968 | 25866.8 |
| putative helicase | SAMEA3485113_04031 | Not Available | Positive | 4135118 - 4136878 | 66489.0 |
| 50s ribosomal protein l25 | SAMEA3485113_04032 | Not Available | Positive | 4137003 - 4137287 | 10693.1 |
| nucleoid-associated protein | SAMEA3485113_04033 | Not Available | Negative | 4137426 - 4138433 | 37825.6 |
| conserved protein, upf0352 family | SAMEA3485113_04034 | Not Available | Positive | 4138615 - 4138842 | 8288.95 |
| putative sulfatase | SAMEA3485113_04035 | Not Available | Positive | 4138862 - 4140622 | 67299.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





