Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate-dependent nitrite reductase complex subunit | SAMEA3485113_03938 | Not Available | Negative | 4056261 - 4056644 | 14559.0 |
| heme lyase subunit nrfe | SAMEA3485113_03939 | Not Available | Negative | 4056637 - 4058259 | 60176.7 |
| cytochrome c-type biogenesis protein | SAMEA3485113_03940 | Not Available | Negative | 4058375 - 4059331 | 35096.5 |
| cytochrome c-type biogenesis protein | SAMEA3485113_03941 | Not Available | Negative | 4059328 - 4059999 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | SAMEA3485113_03942 | Not Available | Negative | 4059996 - 4060562 | 20685.6 |
| cytochrome c552 | SAMEA3485113_03943 | Not Available | Negative | 4060657 - 4062042 | 51724.4 |
| acetyl-coenzyme a synthetase | SAMEA3485113_03944 | Not Available | Positive | 4062435 - 4064393 | 72069.4 |
| inner membrane protein yjch | SAMEA3485113_03945 | Not Available | Positive | 4064619 - 4064933 | 11672.3 |
| cation/acetate symporter | SAMEA3485113_03946 | Not Available | Positive | 4064930 - 4066579 | 59213.7 |
| pentapeptide repeat-containing protein | SAMEA3485113_03947 | Not Available | Positive | 4066757 - 4068049 | 49474.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





