Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative sugar-phosphate isomerase | SAMEA3485113_03927 | Not Available | Negative | 4043203 - 4043520 | 11582.8 |
| metallo-beta-lactamase superfamily protein | SAMEA3485113_03928 | Not Available | Positive | 4043773 - 4045758 | 73214.0 |
| formate dehydrogenase h | SAMEA3485113_03929 | Not Available | Positive | 4045967 - 4046242 | 10294.2 |
| multidrug resistance protein | SAMEA3485113_03930 | Not Available | Positive | 4046261 - 4047292 | 36910.3 |
| multidrug resistance protein | SAMEA3485113_03931 | Not Available | Positive | 4047292 - 4049343 | 76331.5 |
| multidrug resistance outer membrane protein | SAMEA3485113_03932 | Not Available | Positive | 4049340 - 4050806 | 53350.1 |
| formate dehydrogenase-h subunit alpha | SAMEA3485113_03934 | Not Available | Positive | 4051472 - 4053151 | 62465.9 |
| sel1 domain-containing protein | SAMEA3485113_03935 | Not Available | Positive | 4053245 - 4053934 | 25080.4 |
| glutamate/aspartate:proton symporter | SAMEA3485113_03936 | Not Available | Negative | 4054013 - 4055326 | 47134.0 |
| formate-dependent nitrite reductase complex subunit nrfg | SAMEA3485113_03937 | Not Available | Negative | 4055668 - 4056264 | 22785.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





