Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin biosynthesis protein | SAMEA3485113_03857 | Not Available | Negative | 3983545 - 3984780 | 44011.7 |
| putative l-asparaginase | SAMEA3485113_03858 | Not Available | Positive | 3984984 - 3985949 | 33402.0 |
| glutathione transporter atp-binding protein | SAMEA3485113_03859 | Not Available | Positive | 3985936 - 3987807 | 69170.4 |
| putative binding protein ylib precursor | SAMEA3485113_03860 | Not Available | Positive | 3987827 - 3989365 | 56379.9 |
| abc transporter permease | SAMEA3485113_03861 | Not Available | Positive | 3989383 - 3990303 | 34054.5 |
| abc transporter permease | SAMEA3485113_03862 | Not Available | Positive | 3990306 - 3991217 | 33268.3 |
| cyclic di-gmp phosphodiesterase | SAMEA3485113_03863 | Not Available | Positive | 3991395 - 3992600 | 46428.1 |
| transposase is26 fragment | SAMEA3485113_03864 | Not Available | Positive | 3992728 - 3992820 | 3480.3 |
| uncharacterised protein | SAMEA3485113_03865 | Not Available | Positive | 3992876 - 3993592 | 26700.1 |
| putative truncated rhs core protein | SAMEA3485113_03866 | Not Available | Positive | 3993725 - 3997978 | 155140.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





