Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycosyl transferase | SAMEA3485113_03827 | Not Available | Positive | 3948823 - 3949785 | 35078.7 |
| putative dehydrogenase | SAMEA3485113_03828 | Not Available | Positive | 3949926 - 3951011 | 38870.4 |
| protein | SAMEA3485113_03829 | Not Available | Negative | 3951240 - 3951500 | 8568.2 |
| putative zinc ion binding protein | SAMEA3485113_03830 | Not Available | Negative | 3951764 - 3952030 | 9804.42 |
| hydroxylase | SAMEA3485113_03831 | Not Available | Negative | 3952104 - 3952778 | 25397.0 |
| catecholate siderophore tonb-dependent receptor | SAMEA3485113_03832 | Not Available | Negative | 3952823 - 3955105 | 81886.4 |
| protein involved in colanic acid production | SAMEA3485113_03833 | Not Available | Negative | 3955370 - 3955630 | 8896.65 |
| sam-dependent methyltransferase | SAMEA3485113_03834 | Not Available | Positive | 3955906 - 3956832 | 34209.9 |
| membrane protein ybio | SAMEA3485113_03835 | Not Available | Negative | 3956829 - 3959054 | 81901.5 |
| glnq protein, subunit of glutamine abc transporter | SAMEA3485113_03836 | Not Available | Negative | 3959171 - 3959893 | 26733.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





