Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pp_03607 | SAMEA3485113_03795 | Not Available | Negative | 3917172 - 3917675 | Not Available |
| had hydrolase yfhb | SAMEA3485113_03796 | Not Available | Negative | 3917733 - 3918368 | 24437.8 |
| rpir-family transcriptional regulator | SAMEA3485113_03797 | Not Available | Positive | 3918577 - 3919425 | 30709.3 |
| 4fe-4s binding protein | SAMEA3485113_03798 | Not Available | Positive | 3919481 - 3919741 | 9848.85 |
| holo-[acyl-carrier-protein] synthase | SAMEA3485113_03799 | Not Available | Negative | 3920436 - 3920816 | 14095.2 |
| pyridoxine 5'-phosphate synthase | SAMEA3485113_03800 | Not Available | Negative | 3920816 - 3921547 | 26369.9 |
| dna repair protein | SAMEA3485113_03801 | Not Available | Negative | 3921559 - 3922287 | 27392.2 |
| gtp-binding protein era | SAMEA3485113_03802 | Not Available | Negative | 3922299 - 3923204 | 33798.1 |
| signal peptidase i | SAMEA3485113_03804 | Not Available | Negative | 3924154 - 3925128 | 35948.3 |
| gtp-binding protein lepa | SAMEA3485113_03805 | Not Available | Negative | 3925144 - 3926943 | 66574.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





