Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative dehydrogenase | SAMEA3485113_03751 | Not Available | Positive | 3878623 - 3879075 | 17694.4 |
| transposase | SAMEA3485113_03752 | Not Available | Negative | 3879217 - 3879675 | 18044.1 |
| acid shock protein | SAMEA3485113_03754 | Not Available | Positive | 3880240 - 3880548 | 10531.7 |
| putative protease | SAMEA3485113_03755 | Not Available | Positive | 3880824 - 3881645 | 29278.6 |
| transposase | SAMEA3485113_03777 | Not Available | Positive | 3893492 - 3893710 | 8634.18 |
| putative aldose 1-epimerase | SAMEA3485113_03778 | Not Available | Negative | 3893769 - 3894641 | 32655.2 |
| putative zinc-binding dehydrogenase | SAMEA3485113_03779 | Not Available | Negative | 3894653 - 3895714 | 38066.1 |
| abc transporter permease | SAMEA3485113_03780 | Not Available | Negative | 3895780 - 3896778 | 34503.7 |
| putative abc transporter atp-binding protein | SAMEA3485113_03781 | Not Available | Negative | 3896803 - 3898314 | 55056.8 |
| abc transporter substrate-binding protein | SAMEA3485113_03782 | Not Available | Negative | 3898337 - 3899320 | 35129.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





