Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial protein | SAMEA3485113_03710 | Not Available | Positive | 3829191 - 3829724 | 19101.5 |
| putative membrane-associated pilin chaperone | SAMEA3485113_03711 | Not Available | Positive | 3829893 - 3830456 | 20766.9 |
| fimbrial outer membrane usher protein | SAMEA3485113_03712 | Not Available | Positive | 3830469 - 3832919 | 92193.8 |
| ybl1 | SAMEA3485113_03713 | Not Available | Positive | 3832932 - 3833891 | 35840.4 |
| transcriptional activator nhar | SAMEA3485113_03714 | Not Available | Negative | 3833929 - 3834828 | 34040.0 |
| na(+)/h(+) antiporter 1 | SAMEA3485113_03715 | Not Available | Negative | 3834894 - 3836060 | 41332.2 |
| transposase and inactivated derivatives | SAMEA3485113_03716 | Not Available | Negative | 3836312 - 3837556 | 47161.5 |
| putative cerebroside-sulfatase | SAMEA3485113_03717 | Not Available | Negative | 3837686 - 3839179 | 55837.7 |
| nucleoside-specific channel-forming protein tsx | SAMEA3485113_03718 | Not Available | Negative | 3839199 - 3839960 | 29037.8 |
| putative peptidoglycan binding domain-containing protein | SAMEA3485113_03720 | Not Available | Positive | 3841189 - 3843036 | 67858.3 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





