Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyl phosphate synthase small subunit | SAMEA3485113_03700 | Not Available | Negative | 3817037 - 3818185 | 41463.4 |
| dihydrodipicolinate reductase | SAMEA3485113_03701 | Not Available | Negative | 3818641 - 3819462 | 28772.4 |
| nonspecific ribonucleoside hydrolase (purine/pyrimidine ribonucleoside hydrolase) | SAMEA3485113_03702 | Not Available | Negative | 3819629 - 3820543 | 32623.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | SAMEA3485113_03703 | Not Available | Negative | 3820609 - 3821559 | 34776.6 |
| fkbb-type 16 kd peptidyl-prolyl cis-trans isomerase | SAMEA3485113_03704 | Not Available | Negative | 3821561 - 3822010 | 16081.9 |
| lipoprotein signal peptidase | SAMEA3485113_03705 | Not Available | Negative | 3822098 - 3822592 | 18129.3 |
| isoleucyl-trna synthetase | SAMEA3485113_03706 | Not Available | Negative | 3822592 - 3825408 | 104270.0 |
| riboflavin biosynthesis protein | SAMEA3485113_03707 | Not Available | Negative | 3825451 - 3826392 | 34702.4 |
| 30s ribosomal protein s20 | SAMEA3485113_03708 | Not Available | Positive | 3826721 - 3826984 | 9684.94 |
| putative type iii effector protein | SAMEA3485113_03709 | Not Available | Positive | 3827468 - 3828889 | 55921.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





