Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| electron transfer flavoprotein fixa | SAMEA3485113_03690 | Not Available | Negative | 3804633 - 3805403 | 27173.3 |
| l-carnitine/gamma-butyrobetaine antiporter | SAMEA3485113_03691 | Not Available | Positive | 3805876 - 3807390 | 56590.4 |
| crotonobetainyl-coa dehydrogenase | SAMEA3485113_03692 | Not Available | Positive | 3807421 - 3808563 | 42530.8 |
| crotonobetainyl-coa:carnitine coa-transferase | SAMEA3485113_03693 | Not Available | Positive | 3808692 - 3809909 | 45071.2 |
| crotonobetaine/carnitine-coa ligase | SAMEA3485113_03694 | Not Available | Positive | 3809983 - 3811536 | 58579.4 |
| carnitinyl-coa dehydratase | SAMEA3485113_03695 | Not Available | Positive | 3811645 - 3812430 | 28177.8 |
| carnitine operon protein caie | SAMEA3485113_03696 | Not Available | Positive | 3812436 - 3813026 | 21095.5 |
| transcriptional activator | SAMEA3485113_03697 | Not Available | Negative | 3813145 - 3813540 | 15451.1 |
| uncharacterised protein | SAMEA3485113_03698 | Not Available | Positive | 3813575 - 3813793 | 8212.92 |
| carbamoyl-phosphate synthase large subunit | SAMEA3485113_03699 | Not Available | Negative | 3813801 - 3817019 | 117822.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





