Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| murein transglycosylase | SAMEA3485113_03648 | Not Available | Positive | 3761966 - 3763903 | 73396.1 |
| trp operon repressor | SAMEA3485113_03649 | Not Available | Positive | 3764023 - 3764319 | 11370.8 |
| ntpase | SAMEA3485113_03650 | Not Available | Negative | 3764313 - 3764828 | 18462.9 |
| phosphoglycerate mutase | SAMEA3485113_03651 | Not Available | Positive | 3764879 - 3765526 | 24066.7 |
| right origin-binding protein | SAMEA3485113_03652 | Not Available | Negative | 3765523 - 3766392 | 33146.8 |
| crea protein | SAMEA3485113_03653 | Not Available | Positive | 3766603 - 3767076 | 17108.8 |
| two-component response regulator | SAMEA3485113_03654 | Not Available | Positive | 3767089 - 3767778 | 26188.8 |
| two-component system sensor kinase | SAMEA3485113_03655 | Not Available | Positive | 3767778 - 3769202 | 52251.4 |
| inner membrane protein | SAMEA3485113_03656 | Not Available | Positive | 3769260 - 3770612 | 49911.8 |
| aerobic respiration control protein arca | SAMEA3485113_03657 | Not Available | Negative | 3770672 - 3771388 | 27293.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





