Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | SAMEA3485113_03638 | Not Available | Positive | 3752871 - 3754103 | 47334.4 |
| sulfite exporter taue/safe | SAMEA3485113_03639 | Not Available | Positive | 3754517 - 3754903 | 13612.3 |
| sulfite exporter taue/safe | SAMEA3485113_03640 | Not Available | Positive | 3754904 - 3755323 | 14519.9 |
| transcriptional regulator mode | SAMEA3485113_03641 | Not Available | Positive | 3755349 - 3755720 | 13529.5 |
| protein of uncharacterised function (duf1471) | SAMEA3485113_03642 | Not Available | Negative | 3756148 - 3756360 | 7355.82 |
| polyketide cyclase / dehydrase and lipid transport | SAMEA3485113_03643 | Not Available | Negative | 3756518 - 3756934 | 15189.8 |
| putative 3-oxoacyl-[acyl-carrier-protein] reductase | SAMEA3485113_03644 | Not Available | Negative | 3756960 - 3757757 | 27142.4 |
| putative aldo/keto reductase | SAMEA3485113_03645 | Not Available | Negative | 3757777 - 3758787 | 36870.0 |
| putative hth-type transcriptional regulator alsr | SAMEA3485113_03646 | Not Available | Positive | 3758920 - 3759807 | 33053.5 |
| putative abc transporter atp-binding protein yjjk | SAMEA3485113_03647 | Not Available | Negative | 3759963 - 3761630 | 62446.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





