Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine radical enzyme, yjji family | SAMEA3485113_03628 | Not Available | Negative | 3742140 - 3743690 | 58065.4 |
| deoxyribose-phosphate aldolase | SAMEA3485113_03629 | Not Available | Positive | 3743948 - 3744727 | 27735.3 |
| thymidine phosphorylase | SAMEA3485113_03630 | Not Available | Positive | 3744754 - 3746127 | 49230.4 |
| phosphopentomutase | SAMEA3485113_03631 | Not Available | Positive | 3746179 - 3747402 | 44372.4 |
| purine nucleoside phosphorylase | SAMEA3485113_03632 | Not Available | Positive | 3747482 - 3748201 | 25937.4 |
| putative transcriptional regulator | SAMEA3485113_03633 | Not Available | Negative | 3748362 - 3748625 | 9886.28 |
| lipoate-protein ligase a | SAMEA3485113_03634 | Not Available | Negative | 3748657 - 3749673 | 37837.9 |
| smp protein precursor | SAMEA3485113_03635 | Not Available | Negative | 3749701 - 3750345 | 24084.2 |
| phosphoserine phosphatase serb | SAMEA3485113_03636 | Not Available | Positive | 3750451 - 3751419 | 35074.8 |
| dna repair protein rada | SAMEA3485113_03637 | Not Available | Positive | 3751468 - 3752850 | 49435.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





