Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signal transduction protein | SAMEA3485113_03608 | Not Available | Positive | 3719434 - 3720852 | 52065.3 |
| altronate oxidoreductase | SAMEA3485113_03609 | Not Available | Positive | 3721079 - 3722530 | 54854.4 |
| inner membrane protein | SAMEA3485113_03610 | Not Available | Positive | 3722727 - 3723641 | 34880.1 |
| trans-aconitate methyltransferase | SAMEA3485113_03611 | Not Available | Negative | 3723645 - 3724403 | 29038.5 |
| autoinducer-2 (ai-2) modifying protein lsrg | SAMEA3485113_03612 | Not Available | Negative | 3724460 - 3724750 | 11255.4 |
| putative aldolase | SAMEA3485113_03613 | Not Available | Negative | 3724774 - 3725649 | 31866.6 |
| abc transporter substrate-binding protein | SAMEA3485113_03614 | Not Available | Negative | 3725676 - 3726698 | 36714.9 |
| abc transporter permease | SAMEA3485113_03615 | Not Available | Negative | 3726710 - 3727702 | 34444.6 |
| abc transporter permease | SAMEA3485113_03616 | Not Available | Negative | 3727702 - 3728730 | 36515.3 |
| abc transporter atp-binding protein | SAMEA3485113_03617 | Not Available | Negative | 3728724 - 3730259 | 55663.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





