Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein | SAMEA3485113_03546 | Not Available | Negative | 3652817 - 3653101 | 10587.3 |
| uncharacterised protein | SAMEA3485113_03547 | Not Available | Negative | 3653551 - 3654045 | 19090.6 |
| type vi secretion system effector, hcp1 family | SAMEA3485113_03548 | Not Available | Negative | 3654042 - 3655220 | 44320.1 |
| n-acetyltransferase gcn5 | SAMEA3485113_03549 | Not Available | Negative | 3655456 - 3655944 | 18741.6 |
| putative oxidoreductase | SAMEA3485113_03551 | Not Available | Positive | 3656278 - 3657315 | 38772.1 |
| pirin-related protein | SAMEA3485113_03552 | Not Available | Positive | 3657438 - 3658133 | 26292.8 |
| gluconate utilization system gnt-i transcriptional repressor | SAMEA3485113_03553 | Not Available | Positive | 3658357 - 3659352 | 36424.3 |
| gluconate kinase | SAMEA3485113_03554 | Not Available | Positive | 3659491 - 3660018 | 19433.3 |
| low-affinity gluconate transporter | SAMEA3485113_03555 | Not Available | Positive | 3660022 - 3661362 | 46418.9 |
| ditp- and xtp- hydrolase | SAMEA3485113_03556 | Not Available | Negative | 3661419 - 3662012 | 21491.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





