Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage shock protein a | SAMEA3485113_03515 | Not Available | Positive | 3622884 - 3623582 | 25350.0 |
| conserved protein, duf2491 family | SAMEA3485113_03516 | Not Available | Positive | 3623633 - 3624118 | 18302.8 |
| inner membrane protein | SAMEA3485113_03518 | Not Available | Negative | 3624942 - 3625991 | 38466.7 |
| major facilitator superfamily protein | SAMEA3485113_03519 | Not Available | Positive | 3626090 - 3627328 | 43087.6 |
| periplasmic protein dcrb | SAMEA3485113_03520 | Not Available | Negative | 3627332 - 3627889 | 19788.7 |
| inner membrane protein | SAMEA3485113_03521 | Not Available | Negative | 3627962 - 3628627 | 25304.3 |
| sulfurtransferase (trna 2-thiouridine synthesizin protein a) | SAMEA3485113_03522 | Not Available | Positive | 3628849 - 3629094 | 9095.09 |
| zinc/cadmium/mercury/lead-transporting atpase | SAMEA3485113_03523 | Not Available | Negative | 3629196 - 3631394 | 76740.3 |
| inner membrane protein | SAMEA3485113_03524 | Not Available | Negative | 3631468 - 3632094 | 23791.9 |
| putative receptor | SAMEA3485113_03525 | Not Available | Positive | 3632235 - 3632594 | 13543.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





