Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoribonuclease | SAMEA3485113_03495 | Not Available | Positive | 3603903 - 3604448 | 20816.8 |
| Trna-gly | Not Available | Not Available | Positive | 3604659 - 3604734 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3604892 - 3604967 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 3605003 - 3605078 | Not Available |
| electron transport protein yjes | SAMEA3485113_03499 | Not Available | Negative | 3605348 - 3606487 | 43047.3 |
| putative carbohydrate kinase | SAMEA3485113_03500 | Not Available | Positive | 3606501 - 3608033 | 53931.6 |
| putative hydrolase | SAMEA3485113_03501 | Not Available | Positive | 3608005 - 3608466 | 16854.0 |
| n-acetylmuramoyl-l-alanine amidase | SAMEA3485113_03502 | Not Available | Positive | 3608485 - 3609822 | 47930.9 |
| dna mismatch repair protein | SAMEA3485113_03503 | Not Available | Positive | 3609832 - 3611679 | 67832.4 |
| trna delta-2-isopentenylpyrophosphate (ipp) transferase | SAMEA3485113_03504 | Not Available | Positive | 3611672 - 3612622 | 35081.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





