Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit d | SAMEA3485113_03485 | Not Available | Negative | 3591571 - 3591930 | 13107.8 |
| fumarate reductase subunit c | SAMEA3485113_03486 | Not Available | Negative | 3591941 - 3592336 | 15031.8 |
| fumarate reductase iron-sulfur subunit | SAMEA3485113_03487 | Not Available | Negative | 3592347 - 3593081 | 27124.5 |
| fumarate reductase flavoprotein subunit | SAMEA3485113_03488 | Not Available | Negative | 3593074 - 3594882 | 65975.5 |
| lysyl-trna synthetase | SAMEA3485113_03489 | Not Available | Positive | 3595207 - 3596184 | 36978.1 |
| transporter | SAMEA3485113_03490 | Not Available | Positive | 3596448 - 3597905 | 53109.0 |
| inner membrane protein | SAMEA3485113_03491 | Not Available | Positive | 3598015 - 3598317 | 12179.2 |
| mechanosensitive ion channel family protein | SAMEA3485113_03492 | Not Available | Negative | 3598346 - 3601669 | 123963.0 |
| phosphatidylserine decarboxylase proenzyme | SAMEA3485113_03493 | Not Available | Negative | 3601691 - 3602659 | 35926.4 |
| ribosome-associated gtpase | SAMEA3485113_03494 | Not Available | Negative | 3602756 - 3603808 | 39297.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





