Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chaperonin cpn60 | SAMEA3485113_03474 | Not Available | Positive | 3583903 - 3585549 | 57332.4 |
| putative lipoprotein | SAMEA3485113_03475 | Not Available | Positive | 3585687 - 3586040 | 11959.2 |
| protein | SAMEA3485113_03476 | Not Available | Negative | 3586090 - 3586959 | 32948.9 |
| radical sam superfamily protein | SAMEA3485113_03477 | Not Available | Negative | 3587194 - 3588222 | 38674.8 |
| elongation factor p (ef-p) | SAMEA3485113_03478 | Not Available | Positive | 3588264 - 3588830 | 20592.4 |
| entericidin a | SAMEA3485113_03479 | Not Available | Positive | 3588882 - 3589007 | 4329.45 |
| entericidin b | SAMEA3485113_03480 | Not Available | Positive | 3589118 - 3589264 | 4809.81 |
| quaternary ammonium compound-resistance protein | SAMEA3485113_03482 | Not Available | Positive | 3589439 - 3589756 | 10901.0 |
| outer membrane lipoprotein | SAMEA3485113_03483 | Not Available | Negative | 3589753 - 3590286 | 19924.7 |
| beta-lactamase | SAMEA3485113_03484 | Not Available | Negative | 3590375 - 3591508 | 41436.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





