Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iclr family transcriptional regulator | SAMEA3485113_03453 | Not Available | Positive | 3557103 - 3557927 | 29741.1 |
| putative type iii effector protein (ankyrin repeat protein a) | SAMEA3485113_03454 | Not Available | Positive | 3558244 - 3560430 | 82670.0 |
| isocitrate dehydrogenase kinase/phosphatase | SAMEA3485113_03455 | Not Available | Negative | 3560399 - 3562135 | 67628.3 |
| isocitrate lyase | SAMEA3485113_03456 | Not Available | Negative | 3562184 - 3563488 | 47524.1 |
| malate synthase | SAMEA3485113_03457 | Not Available | Negative | 3563518 - 3565119 | 60277.0 |
| homoserine o-succinyltransferase | SAMEA3485113_03458 | Not Available | Negative | 3565388 - 3566317 | 35743.2 |
| putative acetyltransferase | SAMEA3485113_03459 | Not Available | Positive | 3566474 - 3566917 | 16580.9 |
| heat resistant agglutinin 1 | SAMEA3485113_03461 | Not Available | Positive | 3567472 - 3568212 | 27146.0 |
| putative membrane-associated, metal-dependent hydrolase | SAMEA3485113_03462 | Not Available | Positive | 3568394 - 3569893 | 55861.4 |
| superfamily i dna helicase | SAMEA3485113_03463 | Not Available | Negative | 3570002 - 3573517 | 131513.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





