Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator of sorbose uptake and utilization genes | SAMEA3485113_03443 | Not Available | Positive | 3544495 - 3545442 | 34932.8 |
| sorbitol-6-phosphate 2-dehydrogenase | SAMEA3485113_03444 | Not Available | Positive | 3545512 - 3546318 | 29010.6 |
| sorbose-specific pts system eiia component | SAMEA3485113_03445 | Not Available | Positive | 3546328 - 3546735 | 14806.9 |
| sorbose-specific pts system eiib component | SAMEA3485113_03446 | Not Available | Positive | 3546735 - 3547229 | 18405.2 |
| sorbose-specific pts system eiic component | SAMEA3485113_03447 | Not Available | Positive | 3547295 - 3548092 | 27978.0 |
| pts system, mannose-specific iid component | SAMEA3485113_03448 | Not Available | Positive | 3548103 - 3548927 | 29499.9 |
| putative l-sorbose 1-phosphate reductase | SAMEA3485113_03449 | Not Available | Positive | 3548979 - 3550208 | 44769.2 |
| peptidase e | SAMEA3485113_03450 | Not Available | Positive | 3550590 - 3551279 | 24541.7 |
| putative transporter | SAMEA3485113_03451 | Not Available | Negative | 3551369 - 3553000 | 59470.7 |
| b12-dependent methionine synthase | SAMEA3485113_03452 | Not Available | Negative | 3553220 - 3556903 | 136076.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





