Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine 5'-monophosphate dehydrogenase | SAMEA3485113_03401 | Not Available | Positive | 3502077 - 3503543 | 51998.6 |
| bifunctional gmp synthase/glutamine amidotransferase protein | SAMEA3485113_03402 | Not Available | Positive | 3503612 - 3505189 | 58624.5 |
| uncharacterised protein | SAMEA3485113_03403 | Not Available | Negative | 3505282 - 3505821 | 20231.4 |
| putative lipoprotein | SAMEA3485113_03404 | Not Available | Negative | 3505837 - 3506352 | 17574.9 |
| protein | SAMEA3485113_03405 | Not Available | Negative | 3506666 - 3506857 | 7462.05 |
| uncharacterised protein | SAMEA3485113_03406 | Not Available | Positive | 3506875 - 3507027 | 5689.89 |
| putative signal transduction protein | SAMEA3485113_03407 | Not Available | Positive | 3507209 - 3509095 | 72339.7 |
| transposase | SAMEA3485113_03408 | Not Available | Positive | 3509248 - 3509721 | 18194.6 |
| alanine racemase | SAMEA3485113_03409 | Not Available | Negative | 3509797 - 3510876 | 39155.2 |
| replicative dna helicase | SAMEA3485113_03410 | Not Available | Negative | 3510929 - 3512344 | 52407.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





