Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | SAMEA3485113_03377 | Not Available | Positive | 3466990 - 3467325 | 12359.5 |
| fes assembly protein iscx | SAMEA3485113_03378 | Not Available | Positive | 3467337 - 3467537 | 7731.92 |
| peptidase b (aminopeptidase b) | SAMEA3485113_03379 | Not Available | Positive | 3467782 - 3469065 | 46238.6 |
| 3-mercaptopyruvate sulfurtransferase | SAMEA3485113_03383 | Not Available | Negative | 3471159 - 3472004 | 30856.6 |
| putative protease inhibitor | SAMEA3485113_03384 | Not Available | Positive | 3472211 - 3477172 | 181456.0 |
| penicillin-binding protein 1c | SAMEA3485113_03385 | Not Available | Positive | 3477173 - 3479485 | 84981.8 |
| nucleoside diphosphate kinase | SAMEA3485113_03386 | Not Available | Positive | 3479634 - 3480065 | 15464.3 |
| radical sam protein | SAMEA3485113_03387 | Not Available | Positive | 3480215 - 3481369 | 43088.0 |
| putative regulatory protein | SAMEA3485113_03388 | Not Available | Positive | 3481654 - 3482667 | 36176.5 |
| histidyl-trna synthetase | SAMEA3485113_03390 | Not Available | Positive | 3483923 - 3485197 | 47032.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





