Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stationary phase inducible protein csie | SAMEA3485113_03366 | Not Available | Negative | 3457540 - 3458820 | 49109.4 |
| peptidase | SAMEA3485113_03367 | Not Available | Negative | 3459011 - 3459865 | 31627.8 |
| inositol-1-monophosphatase | SAMEA3485113_03368 | Not Available | Negative | 3460010 - 3460813 | 29173.8 |
| putative rna methyltransferase | SAMEA3485113_03369 | Not Available | Positive | 3460932 - 3461672 | 27049.6 |
| fes cluster assembly transcription factor iscr | SAMEA3485113_03370 | Not Available | Positive | 3461942 - 3462430 | 17307.6 |
| cysteine desulfurase | SAMEA3485113_03372 | Not Available | Positive | 3462542 - 3463756 | 45092.2 |
| nifu-like protein | SAMEA3485113_03373 | Not Available | Positive | 3463784 - 3464170 | 13849.3 |
| iron-sulfur cluster assembly protein | SAMEA3485113_03374 | Not Available | Positive | 3464187 - 3464510 | 11556.7 |
| co-chaperone hscb | SAMEA3485113_03375 | Not Available | Positive | 3464606 - 3465121 | 20138.8 |
| chaperone protein hsca | SAMEA3485113_03376 | Not Available | Positive | 3465138 - 3466988 | 65686.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





