Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inner membrane protein | SAMEA3485113_03336 | Not Available | Positive | 3423676 - 3424293 | 22049.8 |
| nad-dependent dna ligase ligb | SAMEA3485113_03337 | Not Available | Negative | 3424290 - 3425972 | 63301.1 |
| guanylate kinase | SAMEA3485113_03338 | Not Available | Positive | 3426230 - 3426853 | 23608.1 |
| rna polymerase omega subunit | SAMEA3485113_03339 | Not Available | Positive | 3426908 - 3427183 | 10237.2 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | SAMEA3485113_03340 | Not Available | Positive | 3427202 - 3429310 | 79379.2 |
| trna (guanosine-2'-o)-methyltransferase | SAMEA3485113_03341 | Not Available | Positive | 3429317 - 3430006 | 25372.7 |
| atp-dependent dna helicase recg | SAMEA3485113_03342 | Not Available | Positive | 3430012 - 3432093 | 76483.1 |
| sodium/glutamate symport carrier protein (glutamate permease) | SAMEA3485113_03343 | Not Available | Negative | 3432127 - 3433332 | 42445.9 |
| purine permease yice | SAMEA3485113_03344 | Not Available | Positive | 3433611 - 3435002 | 48871.2 |
| asma family protein | SAMEA3485113_03345 | Not Available | Positive | 3435123 - 3436832 | 62357.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





