Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | SAMEA3485113_03326 | Not Available | Negative | 3416050 - 3416217 | 6371.94 |
| 50s ribosomal protein l28 | SAMEA3485113_03327 | Not Available | Negative | 3416238 - 3416474 | 9007.02 |
| dna repair protein radc | SAMEA3485113_03328 | Not Available | Negative | 3416691 - 3417359 | 25275.9 |
| bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase | SAMEA3485113_03329 | Not Available | Positive | 3417531 - 3418751 | 43440.7 |
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMEA3485113_03330 | Not Available | Positive | 3418729 - 3419187 | 16288.7 |
| nucleoid occlusion protein | SAMEA3485113_03331 | Not Available | Positive | 3419294 - 3419890 | 22853.7 |
| orotate phosphoribosyltransferase | SAMEA3485113_03332 | Not Available | Negative | 3419927 - 3420568 | 23567.4 |
| ribonuclease ph | SAMEA3485113_03333 | Not Available | Negative | 3420634 - 3421350 | 25298.4 |
| putative alpha helix protein | SAMEA3485113_03334 | Not Available | Positive | 3421477 - 3422340 | 33160.9 |
| dna-damage-inducible protein d | SAMEA3485113_03335 | Not Available | Positive | 3422561 - 3423385 | 31036.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





