Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide 1,2-n-acetylglucosaminetransferase | SAMEA3485113_03315 | Not Available | Negative | 3405986 - 3407128 | 43606.1 |
| udp-glucose:(galactosyl) lps alpha-1,2-glucosyltransferase | SAMEA3485113_03316 | Not Available | Negative | 3407137 - 3408150 | 40043.8 |
| lipopolysaccharide core biosynthesis protein | SAMEA3485113_03317 | Not Available | Negative | 3408175 - 3408882 | 27493.7 |
| udp-galactose:(glucosyl) lps alpha-1,3-galactosyltransferase | SAMEA3485113_03318 | Not Available | Negative | 3408908 - 3409915 | 39269.6 |
| kinase that phosphorylates core heptose of lipopolysaccharide | SAMEA3485113_03319 | Not Available | Negative | 3409958 - 3410755 | 31065.1 |
| udp-glucose:(heptosyl) lps alpha-1,3-glucosyltransferase | SAMEA3485113_03320 | Not Available | Negative | 3410748 - 3411872 | 42618.8 |
| lipopolysaccharide core biosynthesis protein | SAMEA3485113_03321 | Not Available | Negative | 3411869 - 3412927 | 39432.8 |
| 3-deoxy-d-manno-octulosonic-acid transferase | SAMEA3485113_03323 | Not Available | Positive | 3413340 - 3414617 | 47293.9 |
| phosphopantetheine adenylyltransferase | SAMEA3485113_03324 | Not Available | Positive | 3414625 - 3415104 | 17837.7 |
| formamidopyrimidine-dna glycosylase | SAMEA3485113_03325 | Not Available | Negative | 3415143 - 3415952 | 30297.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





