Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein yibp | SAMEA3485113_03305 | Not Available | Positive | 3394609 - 3395868 | 46643.5 |
| putative polysaccharide deacetylase | SAMEA3485113_03306 | Not Available | Positive | 3395872 - 3396831 | 35396.8 |
| putative glycosyl transferase | SAMEA3485113_03307 | Not Available | Negative | 3396818 - 3397852 | 40447.5 |
| threonine 3-dehydrogenase nad(p)-binding protein | SAMEA3485113_03308 | Not Available | Negative | 3398091 - 3399116 | 37243.2 |
| 2-amino-3-ketobutyrate coenzyme a ligase | SAMEA3485113_03309 | Not Available | Negative | 3399126 - 3400322 | 43149.6 |
| involved in lipopolysaccharide biosynthesis | SAMEA3485113_03310 | Not Available | Negative | 3400598 - 3401470 | 34013.6 |
| adp-glyceromanno-heptose 6-epimerase rfad | SAMEA3485113_03311 | Not Available | Positive | 3401759 - 3402691 | 34896.0 |
| adp-heptose--lps-heptosyltransferase ii | SAMEA3485113_03312 | Not Available | Positive | 3402701 - 3403747 | 39002.3 |
| lipopolysaccharide heptosyltransferase 1 | SAMEA3485113_03313 | Not Available | Positive | 3403751 - 3404743 | 36769.1 |
| lipid a-core:surface polymer ligase | SAMEA3485113_03314 | Not Available | Positive | 3404740 - 3405948 | 45924.4 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





