Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cp4-6 prophage dna-binding transcriptional regulator | SAMEA3485113_04894 | Not Available | Negative | 4949540 - 4949713 | 6109.36 |
| uncharacterised protein | SAMEA3485113_04895 | Not Available | Negative | 4949783 - 4949917 | 4887.75 |
| Is3 transposase a | SAMEA3485113_04896 | Not Available | Positive | 4950010 - 4950309 | 11419.7 |
| Is3 transposase b | SAMEA3485113_04897 | Not Available | Positive | 4950306 - 4950773 | 18041.8 |
| putative transposase family protein | SAMEA3485113_04898 | Not Available | Negative | 4950700 - 4951071 | 13789.9 |
| Reverse transcriptase | SAMEA3485113_04899 | Not Available | Positive | 4951365 - 4952888 | 58585.5 |
| putative prophage protein | SAMEA3485113_05076 | Not Available | Negative | 5131898 - 5132116 | 8364.99 |
| plasmid stabilization system protein | SAMEA3485113_05077 | Not Available | Negative | 5132407 - 5132691 | 10906.1 |
| uncharacterised protein | SAMEA3485113_05078 | Not Available | Negative | 5132692 - 5132883 | 7361.65 |
| repressor protein encoded by cryptic prophage cp-933p | SAMEA3485113_05079 | Not Available | Negative | 5133346 - 5133717 | 14360.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





