Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain VRES0683 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1440685 bp
Thymine Count
1427403 bp
Guanine Count
1470512 bp
Cytosine Count
1458442 bp
Genome Length
5800210 bp
Protein-coding Genes
5147 genes
Non-Coding Genes
443 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent rna helicase rhle | SAMEA3485113_03234 | Not Available | Negative | 3328244 - 3329608 | 49978.4 |
| tetr family transcriptional regulator | SAMEA3485113_03235 | Not Available | Positive | 3329837 - 3330508 | 25018.1 |
| hlyd-family secretion protein | SAMEA3485113_03236 | Not Available | Positive | 3330511 - 3331506 | 36287.7 |
| abc transporter | SAMEA3485113_03237 | Not Available | Positive | 3331499 - 3333235 | 63122.3 |
| abc transporter permease | SAMEA3485113_03238 | Not Available | Positive | 3333228 - 3334361 | 42062.4 |
| abc transporter permease | SAMEA3485113_03239 | Not Available | Positive | 3334372 - 3335478 | 41568.2 |
| inner membrane protein | SAMEA3485113_03240 | Not Available | Negative | 3335440 - 3335850 | 15465.6 |
| putative endonuclease/exonuclease/phosphatase | SAMEA3485113_03241 | Not Available | Positive | 3335983 - 3336744 | 28791.4 |
| putative phospholipase | SAMEA3485113_03242 | Not Available | Positive | 3336741 - 3337982 | 47636.2 |
| inner membrane protein | SAMEA3485113_03243 | Not Available | Positive | 3337982 - 3338938 | 35862.5 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





